EnhancerDB
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  3. rs529789171[chr1:39416306]
Enhancers that have rs529789171[chr1:39416306]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs529789171[chr1:39416306]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39416298 39416308 ZNF740 JASPAR yes 28242848
chr1 39416298 39416312 GLIS2 JASPAR yes 28242849
chr1 39416298 39416312 GLIS3 JASPAR yes 28242850
chr1 39416298 39416312 ZIC1 JASPAR yes 28242851
chr1 39416298 39416313 ZIC3 JASPAR yes 28242852
chr1 39416298 39416313 ZIC4 JASPAR yes 28242853
chr1 39416302 39416316 PLAG1 JASPAR yes 28242854
Genes associated with rs529789171[chr1:39416306], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More