EnhancerDB
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  3. rs529798196[chr16:28100688]
Enhancers that have rs529798196[chr16:28100688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28098765 28106942 enh16617
Skin (Keratinocyte) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Placenta Colon (HCT116) Thyroid Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs529798196[chr16:28100688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28100394 28101876 ZNF143 GTRD no Epithelial (MCF-7) 21701328
chr16 28100669 28100689 RREB1 JASPAR yes 10216612
chr16 28100671 28100691 RREB1 JASPAR yes 10216613
chr16 28100674 28100694 RREB1 JASPAR yes 10216614
chr16 28100676 28100696 RREB1 JASPAR yes 10216617
chr16 28100677 28100692 RUNX2 JASPAR yes 10216618
chr16 28100679 28100699 RREB1 JASPAR yes 10216619
chr16 28100680 28100700 RREB1 JASPAR yes 10216620
chr16 28100683 28100698 RUNX2 JASPAR yes 10216621
chr16 28100684 28100704 RREB1 JASPAR yes 10216622
chr16 28100687 28100707 RREB1 JASPAR yes 10216623
Genes associated with rs529798196[chr16:28100688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More