EnhancerDB
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  3. rs530379622[chr6:17909459]
Enhancers that have rs530379622[chr6:17909459]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17902765 17917095 enh23087
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Thyroid Adrenal Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus
Transcript factors that have rs530379622[chr6:17909459]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17909456 17909471 STAT1 JASPAR yes 100404523
chr6 17909458 17909469 STAT1 JASPAR yes 100404524
chr6 17909458 17909469 STAT3 JASPAR yes 100404525
chr6 17909459 17909474 TFAP2C JASPAR yes 100404526
Genes associated with rs530379622[chr6:17909459], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More