EnhancerDB
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  3. rs530442515[chr1:212656213]
Enhancers that have rs530442515[chr1:212656213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
chr1 212656151 212656660 vista5002
VISTA
Transcript factors that have rs530442515[chr1:212656213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 21378808
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868375
chr1 212655217 212656509 ZNF274 GTRD no Cervix (HeLa-S3) 107868376
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 21378809
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 107868377
chr1 212655271 212656313 ZNF274 GTRD no Cervix (HeLa-S3) 107868378
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 21378812
chr1 212655493 212657460 AR GTRD no Prostate (PC-3) 107868381
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 21378814
chr1 212655548 212657045 ZNF143 GTRD no Epithelial (MCF-7) 107868382
chr1 212655715 212656255 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107868384
chr1 212655727 212656631 ZNF274 GTRD no Cervix (HeLa-S3) 21378815
chr1 212655727 212656631 ZNF274 GTRD no Cervix (HeLa-S3) 107868385
chr1 212655739 212656730 ZNF274 GTRD no Cervix (HeLa-S3) 21378816
chr1 212655739 212656730 ZNF274 GTRD no Cervix (HeLa-S3) 107868386
chr1 212655778 212656294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378817
chr1 212655778 212656294 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868387
chr1 212655907 212656436 TCF7L2 GTRD no Colon (HCT116) 21378818
chr1 212655907 212656436 TCF7L2 GTRD no Colon (HCT116) 107868388
chr1 212655918 212656528 ZNF143 GTRD no Epithelial (MCF-7) 21378819
chr1 212655918 212656528 ZNF143 GTRD no Epithelial (MCF-7) 107868389
chr1 212655945 212656320 ZNF274 GTRD no Cervix (HeLa-S3) 21378820
chr1 212655945 212656320 ZNF274 GTRD no Cervix (HeLa-S3) 107868390
chr1 212655987 212656396 ZNF143 GTRD no Epithelial (MCF-7) 21378821
chr1 212655987 212656396 ZNF143 GTRD no Epithelial (MCF-7) 107868391
chr1 212656043 212656449 ZNF143 GTRD no Epithelial (MCF-7) 21378822
chr1 212656043 212656449 ZNF143 GTRD no Epithelial (MCF-7) 107868392
chr1 212656058 212656407 ZNF143 GTRD no Epithelial (MCF-7) 21378823
chr1 212656058 212656407 ZNF143 GTRD no Epithelial (MCF-7) 107868393
chr1 212656076 212656316 ZNF274 GTRD no Blood (GM12878) 107868394
chr1 212656080 212656416 ZNF143 GTRD no Epithelial (MCF-7) 21378824
chr1 212656080 212656416 ZNF143 GTRD no Epithelial (MCF-7) 107868395
chr1 212656107 212656457 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107868396
chr1 212656127 212656511 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107868397
chr1 212656138 212656448 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107868398
chr1 212656144 212656408 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107868399
chr1 212656154 212656444 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21378825
chr1 212656154 212656444 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107868400
chr1 212656191 212656455 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107868401
chr1 212656202 212656478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107868402
chr1 212656204 212656219 RUNX2 JASPAR yes 35128494
chr1 212656204 212656219 RUNX2 JASPAR yes 118452934
chr1 212656207 212656218 RUNX1 JASPAR yes 35128495
chr1 212656207 212656218 RUNX1 JASPAR yes 118452935
chr1 212656208 212656218 RUNX3 JASPAR yes 35128496
chr1 212656208 212656218 RUNX3 JASPAR yes 118452936
chr1 212656209 212656218 RUNX2 JASPAR yes 35128497
chr1 212656209 212656218 RUNX2 JASPAR yes 118452937
Genes associated with rs530442515[chr1:212656213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More