EnhancerDB
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  3. rs530508143[chr1:228978390]
Enhancers that have rs530508143[chr1:228978390]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs530508143[chr1:228978390]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228977803 228978463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388933
chr1 228977803 228978463 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877550
chr1 228977882 228978422 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877552
chr1 228977885 228978425 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877553
chr1 228977892 228978468 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107877554
chr1 228977893 228978423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388935
chr1 228977893 228978423 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877555
chr1 228978019 228978495 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21388947
chr1 228978019 228978495 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107877572
chr1 228978340 228979138 ZNF274 GTRD no Liver (HepG2) 21388956
chr1 228978389 228978393 NFE TRANSFAC yes 35934842
chr1 228978389 228978938 ZNF274 GTRD no Liver (HepG2) 21388957
Genes associated with rs530508143[chr1:228978390], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More