EnhancerDB
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  3. rs530562843[chr12:53355471]
Enhancers that have rs530562843[chr12:53355471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs530562843[chr12:53355471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53354658 53355569 ZNF274 GTRD no Bone Marrow (K562) 21548268
chr12 53354677 53356506 TCF7L2 GTRD no Colon (HCT116) 21548269
chr12 53354777 53355998 ZNF274 GTRD no Bone Marrow (K562) 21548270
chr12 53354813 53355842 ZNF274 GTRD no Bone Marrow (K562) 21548271
chr12 53354913 53356108 ZNF274 GTRD no Bone Marrow (K562) 21548272
chr12 53354917 53356295 ZNF274 GTRD no Bone Marrow (K562) 21548273
chr12 53354938 53355700 ZNF274 GTRD no Bone Marrow (K562) 21548274
chr12 53354941 53356307 ZNF274 GTRD no Bone Marrow (K562) 21548276
chr12 53355018 53355578 ZNF274 GTRD no Bone Marrow (K562) 21548279
chr12 53355026 53355481 ZNF274 GTRD no Bone Marrow (K562) 21548280
chr12 53355027 53355547 ZNF274 GTRD no Bone Marrow (K562) 21548281
chr12 53355042 53356222 ZNF274 GTRD no Bone Marrow (K562) 21548282
chr12 53355052 53355492 ZNF274 GTRD no Bone Marrow (K562) 21548283
chr12 53355056 53356209 ZNF274 GTRD no Bone Marrow (K562) 21548284
chr12 53355076 53355722 ZNF274 GTRD no Bone Marrow (K562) 21548286
chr12 53355090 53355556 ZNF274 GTRD no Bone Marrow (K562) 21548288
chr12 53355101 53356040 ZNF274 GTRD no Bone Marrow (K562) 21548291
chr12 53355156 53355557 ZNF274 GTRD no Bone Marrow (K562) 21548296
chr12 53355158 53355484 ZNF274 GTRD no Bone Marrow (K562) 21548297
chr12 53355369 53355791 ZNF274 GTRD no Bone Marrow (K562) 21548299
chr12 53355401 53356078 TCF7L2 GTRD no Colon (HCT116) 21548300
chr12 53355463 53355471 FOXL1 JASPAR yes 120966720
Genes associated with rs530562843[chr12:53355471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More