EnhancerDB
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  3. rs530696125[chr2:238352230]
Enhancers that have rs530696125[chr2:238352230]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238336205 238371002 enh19393
Brain (SK-N-MC) Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs530696125[chr2:238352230]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238352213 238352233 RREB1 JASPAR yes 82109933
chr2 238352224 238352244 RREB1 JASPAR yes 82109934
chr2 238352224 238352245 IRF1 JASPAR yes 82109935
chr2 238352226 238352241 STAT2 JASPAR yes 82109936
chr2 238352228 238352243 IRF9 JASPAR yes 82109937
chr2 238352229 238352250 IRF1 JASPAR yes 82109938
chr2 238352230 238352251 IRF1 JASPAR yes 82109939
Genes associated with rs530696125[chr2:238352230], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More