EnhancerDB
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  3. rs530821820[chr17:45963536]
Enhancers that have rs530821820[chr17:45963536]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 45938065 45965315 enh17194
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs530821820[chr17:45963536]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 45962794 45963545 ZNF274 GTRD no Bone Marrow (K562) 21767215
chr17 45963076 45964239 TCF7L2 GTRD no Colon (HCT116) 21767216
chr17 45963239 45964235 TCF7L2 GTRD no Colon (HCT116) 21767217
chr17 45963250 45963711 ZNF143 GTRD no Epithelial (MCF-7) 21767218
chr17 45963262 45964247 TCF7L2 GTRD no Colon (HCT116) 21767219
chr17 45963287 45963612 ZNF143 GTRD no Epithelial (MCF-7) 21767220
chr17 45963297 45963541 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767221
chr17 45963522 45963537 FOXA1 JASPAR yes 54546340
chr17 45963523 45963538 FOXP1 JASPAR yes 54546342
chr17 45963524 45963536 FOXC2 JASPAR yes 54546343
chr17 45963524 45963538 FOXF2 JASPAR yes 54546344
chr17 45963524 45963538 ONECUT2 JASPAR yes 54546345
chr17 45963524 45963538 ONECUT3 JASPAR yes 54546346
chr17 45963525 45963536 FOXB1 JASPAR yes 54546347
chr17 45963525 45963536 FOXC1 JASPAR yes 54546348
chr17 45963526 45963541 MEF2A JASPAR yes 54546350
chr17 45963527 45963542 MEF2C JASPAR yes 54546351
Genes associated with rs530821820[chr17:45963536], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More