EnhancerDB
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  3. rs530833992[chr17:39818309]
Enhancers that have rs530833992[chr17:39818309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs530833992[chr17:39818309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 21758082
chr17 39817613 39822691 ZNF274 GTRD no Blood (GM12878) 108259243
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 21758083
chr17 39817750 39822683 ZNF274 GTRD no Blood (GM12878) 108259244
chr17 39818299 39818309 TBX21 JASPAR yes 54269865
chr17 39818300 39818309 ZEB1 JASPAR yes 54269871
chr17 39818300 39818312 PKNOX1 JASPAR yes 54269872
chr17 39818300 39818312 TGIF1 JASPAR yes 54269873
chr17 39818300 39818313 ZBTB18 JASPAR yes 54269874
chr17 39818301 39818311 FIGLA JASPAR yes 54269875
chr17 39818301 39818311 ID4 JASPAR yes 54269876
chr17 39818301 39818311 TCF3 JASPAR yes 54269877
chr17 39818301 39818311 TCF4 JASPAR yes 54269878
chr17 39818302 39818311 SNAI2 JASPAR yes 54269879
chr17 39818309 39818330 LUN1 TRANSFAC yes 54269881
Genes associated with rs530833992[chr17:39818309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More