EnhancerDB
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  3. rs530853275[chr12:123581569]
Enhancers that have rs530853275[chr12:123581569]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 123565265 123589735 enh2666
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs530853275[chr12:123581569]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 123581554 123581569 MEF2A JASPAR yes 124318153
chr12 123581555 123581570 FOXP1 JASPAR yes 124318154
chr12 123581555 123581570 MEF2C JASPAR yes 124318155
chr12 123581560 123581570 HOXA13 JASPAR yes 124318162
chr12 123581560 123581570 HOXB13 JASPAR yes 124318163
chr12 123581560 123581570 HOXD13 JASPAR yes 124318164
chr12 123581560 123581571 HOXA10 JASPAR yes 124318165
chr12 123581561 123581570 CDX1 JASPAR yes 124318166
chr12 123581561 123581572 CDX2 JASPAR yes 124318167
chr12 123581562 123581574 MEF2A JASPAR yes 124318168
chr12 123581562 123581574 MEF2B JASPAR yes 124318169
chr12 123581562 123581574 MEF2D JASPAR yes 124318170
chr12 123581565 123581581 POU4F2 JASPAR yes 124318171
chr12 123581565 123581581 POU4F3 JASPAR yes 124318172
chr12 123581566 123581581 FOXA1 JASPAR yes 124318173
chr12 123581567 123581579 FOXI1 JASPAR yes 124318174
chr12 123581567 123581581 POU4F1 JASPAR yes 124318175
chr12 123581567 123581582 HNF1A JASPAR yes 124318176
chr12 123581568 123581580 FOXC2 JASPAR yes 124318177
chr12 123581568 123581581 HNF1B JASPAR yes 124318178
chr12 123581568 123581582 ONECUT2 JASPAR yes 124318179
chr12 123581568 123581582 ONECUT3 JASPAR yes 124318180
chr12 123581568 123581582 POU4F1 JASPAR yes 124318181
chr12 123581569 123581580 FOXB1 JASPAR yes 124318182
chr12 123581569 123581580 FOXC1 JASPAR yes 124318183
chr12 123581569 123581580 PROP1 JASPAR yes 124318184
chr12 123581569 123581585 POU4F2 JASPAR yes 124318185
chr12 123581569 123581585 POU4F3 JASPAR yes 124318186
Genes associated with rs530853275[chr12:123581569], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More