EnhancerDB
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  3. rs530917088[chr1:17843828]
Enhancers that have rs530917088[chr1:17843828]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17837825 17860915 enh11557
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Esophagus Liver Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs530917088[chr1:17843828]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17843819 17843829 HOXA13 JASPAR yes 27096778
chr1 17843819 17843829 HOXB13 JASPAR yes 27096779
chr1 17843819 17843829 HOXD13 JASPAR yes 27096780
chr1 17843819 17843830 HOXA10 JASPAR yes 27096781
chr1 17843820 17843829 CDX1 JASPAR yes 27096782
chr1 17843820 17843831 CDX2 JASPAR yes 27096783
chr1 17843821 17843833 MEF2A JASPAR yes 27096784
chr1 17843821 17843833 MEF2B JASPAR yes 27096785
chr1 17843821 17843833 MEF2D JASPAR yes 27096786
chr1 17843827 17843843 POU4F3 JASPAR yes 27096787
chr1 17843828 17843843 FOXA1 JASPAR yes 27096788
Genes associated with rs530917088[chr1:17843828], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More