EnhancerDB
  1. Home
  2. SNP
  3. rs530978611[chr1:31517180]
Enhancers that have rs530978611[chr1:31517180]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31495565 31517775 enh193
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Neural Stem Cells (H9)
Transcript factors that have rs530978611[chr1:31517180]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31516884 31517962 ZNF274 GTRD no Bone Marrow (K562) 107802717
chr1 31517165 31517184 CTCF JASPAR yes 27902789
chr1 31517166 31517181 ZIC3 JASPAR yes 27902790
chr1 31517166 31517181 ZIC4 JASPAR yes 27902791
chr1 31517167 31517181 ZIC1 JASPAR yes 27902792
chr1 31517168 31517181 TFAP2A JASPAR yes 27902793
chr1 31517168 31517181 TFAP2C JASPAR yes 27902794
chr1 31517169 31517180 EBF1 JASPAR yes 27902795
chr1 31517174 31517181 SP1 TRANSFAC yes 27902796
chr1 31517174 31517184 SP1 JASPAR yes 27902797
chr1 31517176 31517181 SP1 TRANSFAC yes 27902798
Genes associated with rs530978611[chr1:31517180], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More