EnhancerDB
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  3. rs530980178[chr17:80465412]
Enhancers that have rs530980178[chr17:80465412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80448407 80467804 enh4648
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs530980178[chr17:80465412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80463711 80465526 TCF7L2 GTRD no Colon (HCT116) 21800702
chr17 80465270 80465768 MYOD GTRD no Muscle (Myoblast) 21800706
chr17 80465399 80465414 FOXA1 JASPAR yes 56369213
chr17 80465400 80465415 FOXP1 JASPAR yes 56369214
chr17 80465400 80465416 SOX8 JASPAR yes 56369215
chr17 80465401 80465412 FOXP2 JASPAR yes 56369216
chr17 80465403 80465414 FOXA1 JASPAR yes 56369226
chr17 80465409 80465424 FOXP1 JASPAR yes 56369227
chr17 80465412 80465424 IRF1 JASPAR yes 56369228
chr17 80465412 80465432 RREB1 JASPAR yes 56369229
Genes associated with rs530980178[chr17:80465412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More