EnhancerDB
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  3. rs531025274[chr17:39930599]
Enhancers that have rs531025274[chr17:39930599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39926525 39940665 enh17154
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Esophagus Astrocyte Lung Placenta Colon (HCT116) Uterus Thyroid Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs531025274[chr17:39930599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39930579 39930600 IRF1 JASPAR yes 54274723
chr17 39930581 39930602 IRF1 JASPAR yes 54274724
chr17 39930585 39930606 IRF1 JASPAR yes 54274725
chr17 39930587 39930602 PRDM1 JASPAR yes 54274726
chr17 39930587 39930602 STAT2 JASPAR yes 54274727
chr17 39930588 39930602 SPIC JASPAR yes 54274728
chr17 39930588 39930602 STAT1 JASPAR yes 54274729
chr17 39930590 39930605 FOXP1 JASPAR yes 54274730
Genes associated with rs531025274[chr17:39930599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More