EnhancerDB
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  3. rs531098436[chr1:202060262]
Enhancers that have rs531098436[chr1:202060262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs531098436[chr1:202060262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 21366741
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857760
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857761
chr1 202060178 202060498 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21367000
chr1 202060195 202060485 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21367001
chr1 202060204 202060474 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21367002
chr1 202060207 202060437 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21367003
chr1 202060214 202060464 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21367004
chr1 202060218 202060408 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21367005
chr1 202060230 202060506 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21367006
chr1 202060249 202060411 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21367007
chr1 202060257 202060266 POU5F1B JASPAR yes 34552391
Genes associated with rs531098436[chr1:202060262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More