EnhancerDB
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  3. rs531227595[chr6:12043590]
Enhancers that have rs531227595[chr6:12043590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 12042640 12055275 enh8953
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Muscle (Myotube) Blood (T-cell) Stomach
Transcript factors that have rs531227595[chr6:12043590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 12043585 12043606 IRF1 JASPAR yes 99939658
chr6 12043586 12043607 IRF1 JASPAR yes 99939659
chr6 12043587 12043602 FOXP1 JASPAR yes 99939660
chr6 12043587 12043608 IRF1 JASPAR yes 99939661
chr6 12043588 12043603 FOXP1 JASPAR yes 99939662
chr6 12043588 12043609 IRF1 JASPAR yes 99939663
chr6 12043589 12043604 FOXP1 JASPAR yes 99939664
chr6 12043589 12043610 IRF1 JASPAR yes 99939665
chr6 12043590 12043605 FOXP1 JASPAR yes 99939666
chr6 12043590 12043611 IRF1 JASPAR yes 99939667
Genes associated with rs531227595[chr6:12043590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More