EnhancerDB
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  3. rs531248888[chr12:54657563]
Enhancers that have rs531248888[chr12:54657563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54649185 54662915 enh2377
Bone Marrow (K562) Cervix (HeLa-S3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Uterus Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Heart
Transcript factors that have rs531248888[chr12:54657563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54657545 54657566 IRF1 JASPAR yes 121032178
chr12 54657546 54657567 IRF1 JASPAR yes 121032180
chr12 54657547 54657568 IRF1 JASPAR yes 121032182
chr12 54657548 54657563 FOXP1 JASPAR yes 121032183
chr12 54657548 54657569 IRF1 JASPAR yes 121032184
chr12 54657549 54657564 FOXP1 JASPAR yes 121032185
chr12 54657549 54657570 IRF1 JASPAR yes 121032186
chr12 54657550 54657565 FOXP1 JASPAR yes 121032187
chr12 54657550 54657571 IRF1 JASPAR yes 121032188
chr12 54657551 54657566 FOXP1 JASPAR yes 121032189
chr12 54657551 54657572 IRF1 JASPAR yes 121032190
chr12 54657552 54657567 FOXP1 JASPAR yes 121032191
chr12 54657552 54657573 IRF1 JASPAR yes 121032192
chr12 54657553 54657568 FOXP1 JASPAR yes 121032193
chr12 54657555 54657570 FOXP1 JASPAR yes 121032194
chr12 54657556 54657577 IRF1 JASPAR yes 121032195
chr12 54657557 54657572 FOXP1 JASPAR yes 121032196
chr12 54657557 54657578 IRF1 JASPAR yes 121032197
chr12 54657561 54657582 IRF1 JASPAR yes 121032198
chr12 54657562 54657577 FOXP1 JASPAR yes 121032199
chr12 54657562 54657583 IRF1 JASPAR yes 121032200
chr12 54657563 54657584 IRF1 JASPAR yes 121032201
Genes associated with rs531248888[chr12:54657563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More