EnhancerDB
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  3. rs531588965[chr17:55739354]
Enhancers that have rs531588965[chr17:55739354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55736279 55747115 enh4495
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Kidney Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs531588965[chr17:55739354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55739349 55739359 ID4 JASPAR yes 54980614
chr17 55739349 55739359 TCF3 JASPAR yes 54980615
chr17 55739349 55739359 TCF4 JASPAR yes 54980616
chr17 55739350 55739359 SNAI2 JASPAR yes 54980617
chr17 55739351 55739356 USF2 TRANSFAC yes 54980618
Genes associated with rs531588965[chr17:55739354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More