EnhancerDB
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  3. rs531619461[chr6:41674229]
Enhancers that have rs531619461[chr6:41674229]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs531619461[chr6:41674229]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540185
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540186
chr6 41672588 41676369 POLR2A UCSC Txn Factor no Conserved 108540187
chr6 41674210 41674230 RREB1 JASPAR yes 101667194
chr6 41674213 41674233 RREB1 JASPAR yes 101667196
chr6 41674216 41674236 RREB1 JASPAR yes 101667197
chr6 41674217 41674237 RREB1 JASPAR yes 101667198
chr6 41674220 41674240 RREB1 JASPAR yes 101667199
chr6 41674221 41674241 RREB1 JASPAR yes 101667200
chr6 41674222 41674232 SP1 JASPAR yes 101667201
chr6 41674224 41674234 ZNF740 JASPAR yes 101667202
chr6 41674224 41674244 RREB1 JASPAR yes 101667203
chr6 41674225 41674237 INSM1 JASPAR yes 101667204
chr6 41674227 41674247 RREB1 JASPAR yes 101667205
Genes associated with rs531619461[chr6:41674229], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More