EnhancerDB
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  3. rs531827939[chr18:56662424]
Enhancers that have rs531827939[chr18:56662424]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56653868 56668695 enh4877
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung Lung (A549) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Stomach Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs531827939[chr18:56662424]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56661221 56662680 AR GTRD no Prostate (PC-3) 21824477
chr18 56662422 56662437 MEF2A JASPAR yes 110998446
chr18 56662423 56662438 MEF2C JASPAR yes 110998447
chr18 56662424 56662436 FOXC2 JASPAR yes 110998448
chr18 56662424 56662436 MEF2A JASPAR yes 110998449
chr18 56662424 56662436 MEF2B JASPAR yes 110998450
chr18 56662424 56662436 MEF2D JASPAR yes 110998451
Genes associated with rs531827939[chr18:56662424], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More