EnhancerDB
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  3. rs531855561[chr1:212417033]
Enhancers that have rs531855561[chr1:212417033]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212396705 212423635 enh12640
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs531855561[chr1:212417033]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212417028 212417043 MEF2C JASPAR yes 35114288
chr1 212417029 212417044 MEF2A JASPAR yes 35114289
chr1 212417031 212417046 FOXP1 JASPAR yes 35114290
chr1 212417032 212417038 TBP TRANSFAC yes 35114291
chr1 212417032 212417047 FOXP1 JASPAR yes 35114292
chr1 212417032 212417053 IRF1 JASPAR yes 35114293
chr1 212417033 212417048 FOXP1 JASPAR yes 35114294
chr1 212417033 212417054 IRF1 JASPAR yes 35114295
Genes associated with rs531855561[chr1:212417033], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More