EnhancerDB
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  3. rs531990084[chr16:11446406]
Enhancers that have rs531990084[chr16:11446406]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11445105 11460875 enh3886
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs531990084[chr16:11446406]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11446400 11446421 IRF1 JASPAR yes 9508630
chr16 11446402 11446417 STAT2 JASPAR yes 9508631
chr16 11446402 11446423 IRF1 JASPAR yes 9508632
chr16 11446403 11446424 IRF1 JASPAR yes 9508633
chr16 11446404 11446425 IRF1 JASPAR yes 9508634
chr16 11446405 11446420 FOXP1 JASPAR yes 9508635
chr16 11446405 11446426 IRF1 JASPAR yes 9508636
chr16 11446406 11446421 FOXP1 JASPAR yes 9508637
chr16 11446406 11446427 IRF1 JASPAR yes 9508638
Genes associated with rs531990084[chr16:11446406], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More