EnhancerDB
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  3. rs532052773[chr12:52426398]
Enhancers that have rs532052773[chr12:52426398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr12 52426305 52426422 vista13434
VISTA
Transcript factors that have rs532052773[chr12:52426398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52425992 52427385 POLR2A UCSC Txn Factor no Conserved 108032910
chr12 52425992 52427385 POLR2A UCSC Txn Factor no Conserved 108032911
chr12 52426320 52426970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546015
chr12 52426320 52426970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032912
chr12 52426320 52426970 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032913
chr12 52426392 52426407 IRF9 JASPAR yes 82405112
chr12 52426392 52426407 IRF9 JASPAR yes 120914493
Genes associated with rs532052773[chr12:52426398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More