EnhancerDB
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  3. rs532498530[chr16:88263958]
Enhancers that have rs532498530[chr16:88263958]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs532498530[chr16:88263958]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88262812 88264212 TCF7L2 GTRD no Colon (HCT116) 21735441
chr16 88262863 88265383 TCF7L2 GTRD no Colon (HCT116) 21735442
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 21735446
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 108221839
chr16 88263596 88264324 ZNF143 GTRD no Epithelial (MCF-7) 21735447
chr16 88263753 88264251 TCF7L2 GTRD no Colon (HCT116) 21735448
chr16 88263914 88264331 ZNF143 GTRD no Epithelial (MCF-7) 21735449
chr16 88263948 88263959 EBF1 JASPAR yes 12268236
chr16 88263948 88263961 TFAP2A JASPAR yes 12268237
chr16 88263948 88263961 TFAP2B JASPAR yes 12268238
chr16 88263948 88263961 TFAP2C JASPAR yes 12268239
Genes associated with rs532498530[chr16:88263958], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More