EnhancerDB
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  3. rs532546943[chr1:228074333]
Enhancers that have rs532546943[chr1:228074333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs532546943[chr1:228074333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228072370 228074595 TCF7L2 GTRD no Colon (HCT116) 107876769
chr1 228072579 228074663 TCF7L2 GTRD no Colon (HCT116) 107876772
chr1 228072843 228074594 TCF7L2 GTRD no Colon (HCT116) 107876773
chr1 228072913 228074553 TCF7L2 GTRD no Colon (HCT116) 107876774
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 21388236
chr1 228072920 228074595 ZNF143 GTRD no Epithelial (MCF-7) 107876775
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 21388237
chr1 228073205 228074628 ZNF143 GTRD no Epithelial (MCF-7) 107876777
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 21388238
chr1 228073229 228074677 ZNF274 GTRD no Bone Marrow (K562) 107876778
chr1 228073280 228074467 ZNF274 GTRD no Bone Marrow (K562) 21388240
chr1 228073477 228074589 ZNF143 GTRD no Epithelial (MCF-7) 21388246
chr1 228073493 228074463 ZNF274 GTRD no Bone Marrow (K562) 21388249
chr1 228073499 228074601 ZNF143 GTRD no Epithelial (MCF-7) 21388251
chr1 228073551 228074394 ZNF274 GTRD no Bone Marrow (K562) 21388253
chr1 228073598 228074355 ZNF274 GTRD no Cervix (HeLa-S3) 21388255
chr1 228073693 228074496 ZNF143 GTRD no Epithelial (MCF-7) 21388258
chr1 228073724 228074379 ZNF274 GTRD no Bone Marrow (K562) 21388259
chr1 228073725 228074432 ZNF274 GTRD no Bone Marrow (K562) 21388260
chr1 228073738 228074786 ZNF274 GTRD no Bone Marrow (K562) 21388261
chr1 228073789 228074361 ZNF143 GTRD no Epithelial (MCF-7) 21388265
chr1 228073878 228074344 ZNF274 GTRD no Bone Marrow (K562) 21388271
chr1 228074296 228074540 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21388280
chr1 228074308 228074646 ZNF274 GTRD no Bone Marrow (K562) 21388281
chr1 228074317 228074336 REST JASPAR yes 35890550
chr1 228074326 228074345 REST JASPAR yes 35890551
Genes associated with rs532546943[chr1:228074333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More