EnhancerDB
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  3. rs532936704[chr17:70420906]
Enhancers that have rs532936704[chr17:70420906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs532936704[chr17:70420906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784993
chr17 70418498 70422777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108290126
chr17 70420495 70420995 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785087
chr17 70420718 70420954 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21785088
chr17 70420904 70420919 TFAP2A JASPAR yes 55786654
chr17 70420904 70420919 TFAP2C JASPAR yes 55786655
chr17 70420906 70420921 HNF4G JASPAR yes 55786656
Genes associated with rs532936704[chr17:70420906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More