EnhancerDB
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  3. rs533004224[chr12:117020854]
Enhancers that have rs533004224[chr12:117020854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533004224[chr12:117020854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117020845 117020854 VENTX JASPAR yes 124010784
chr12 117020845 117020855 GBX2 JASPAR yes 124010785
chr12 117020845 117020855 GSX2 JASPAR yes 124010786
chr12 117020845 117020855 HOXB3 JASPAR yes 124010787
chr12 117020845 117020855 MNX1 JASPAR yes 124010788
chr12 117020845 117020855 RAX JASPAR yes 124010789
chr12 117020845 117020856 HOXA10 JASPAR yes 124010790
chr12 117020846 117020854 BARX1 JASPAR yes 124010791
chr12 117020846 117020854 BSX JASPAR yes 124010792
chr12 117020846 117020854 ISL2 JASPAR yes 124010793
chr12 117020846 117020854 LMX1B JASPAR yes 124010794
chr12 117020846 117020854 MSX1 JASPAR yes 124010795
chr12 117020846 117020854 MSX2 JASPAR yes 124010796
chr12 117020846 117020856 HOXD13 JASPAR yes 124010797
chr12 117020847 117020858 PHOX2A JASPAR yes 124010798
chr12 117020847 117020858 PROP1 JASPAR yes 124010799
Genes associated with rs533004224[chr12:117020854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More