EnhancerDB
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  3. rs533023465[chr1:203295857]
Enhancers that have rs533023465[chr1:203295857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203277525 203300170 enh883
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs533023465[chr1:203295857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203295613 203296023 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368662
chr1 203295753 203296704 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368663
chr1 203295753 203296704 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858743
chr1 203295753 203297464 POLR2A UCSC Txn Factor no Conserved 107858744
chr1 203295753 203297464 POLR2A UCSC Txn Factor no Conserved 107858745
chr1 203295773 203296035 ZNF274 GTRD no Blood (GM12878) 21368664
chr1 203295780 203296440 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21368665
chr1 203295780 203296440 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858746
chr1 203295788 203296185 MEF2B GTRD no Blood (Karpas-422) 21368666
chr1 203295837 203296163 ZNF274 GTRD no Blood (GM12878) 21368667
chr1 203295856 203295861 TFAP2A TRANSFAC yes 34618186
chr1 203295856 203295862 MZF1 JASPAR yes 34618187
Genes associated with rs533023465[chr1:203295857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More