EnhancerDB
  1. Home
  2. SNP
  3. rs533050409[chr16:88306633]
Enhancers that have rs533050409[chr16:88306633]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88291992 88310485 enh16901
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Heart
Transcript factors that have rs533050409[chr16:88306633]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88304890 88306784 ZNF143 GTRD no Epithelial (MCF-7) 21735774
chr16 88305715 88307909 AR GTRD no Prostate (PC-3) 21735780
chr16 88305755 88307888 ZBTB33 GTRD no Brain (SK-N-SH) 21735781
chr16 88306052 88308120 TEF1 GTRD no Bone (Osteoblast) 21735782
chr16 88306157 88306787 TCF7L2 GTRD no Colon (HCT116) 21735783
chr16 88306211 88306876 TCF7L2 GTRD no Colon (HCT116) 21735784
chr16 88306320 88307680 ZBTB33 GTRD no Brain (SK-N-SH) 21735785
chr16 88306512 88307794 ZBTB33 GTRD no Brain (SK-N-SH) 21735786
chr16 88306546 88307714 ZBTB33 GTRD no Brain (SK-N-SH) 21735787
chr16 88306548 88307833 ZBTB33 GTRD no Brain (SK-N-SH) 21735788
chr16 88306568 88307742 ZBTB33 GTRD no Brain (SK-N-SH) 21735789
chr16 88306587 88307801 ZBTB33 GTRD no Brain (SK-N-SH) 21735790
chr16 88306621 88307848 ZBTB33 GTRD no Brain (SK-N-SH) 21735791
chr16 88306627 88306647 RREB1 JASPAR yes 12272834
chr16 88306627 88307717 ZBTB33 GTRD no Lung (A549) 21735792
Genes associated with rs533050409[chr16:88306633], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More