EnhancerDB
  1. Home
  2. SNP
  3. rs533173446[chr19:13169139]
Enhancers that have rs533173446[chr19:13169139]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 13160145 13191995 enh17930
Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs533173446[chr19:13169139]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 21850576
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 107690442
chr19 13166418 13170584 TCF7L2 GTRD no Colon (HCT116) 108388444
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 107690450
chr19 13166741 13169326 ZNF274 GTRD no Blood (GM12878) 108388452
chr19 13169131 13169148 ESR1 JASPAR yes 112506176
Genes associated with rs533173446[chr19:13169139], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More