EnhancerDB
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  3. rs533190208[chr4:1188153]
Enhancers that have rs533190208[chr4:1188153]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 1176165 1188755 enh21304
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Prostate (RWPE1) Lung Heart
Transcript factors that have rs533190208[chr4:1188153]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 1188150 1188165 TFAP2C JASPAR yes 87800144
chr4 1188153 1188164 TFAP2A JASPAR yes 87800145
chr4 1188153 1188164 TFAP2B JASPAR yes 87800146
chr4 1188153 1188164 TFAP2C JASPAR yes 87800147
chr4 1188153 1188165 TFAP2A JASPAR yes 87800148
Genes associated with rs533190208[chr4:1188153], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More