EnhancerDB
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  3. rs533231462[chr12:47617402]
Enhancers that have rs533231462[chr12:47617402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47604098 47625535 enh2315
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs533231462[chr12:47617402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47617392 47617406 GLIS3 JASPAR yes 120686114
chr12 47617399 47617409 NFKB1 JASPAR yes 120686115
chr12 47617399 47617409 REL JASPAR yes 120686116
chr12 47617401 47617406 GATA2 JASPAR yes 120686117
chr12 47617402 47617413 SPDEF JASPAR yes 120686118
Genes associated with rs533231462[chr12:47617402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More