EnhancerDB
  1. Home
  2. SNP
  3. rs533339939[chr17:62406066]
Enhancers that have rs533339939[chr17:62406066]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 62401882 62412055 enh17297
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Lung Stomach Muscle (A673) Placenta Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs533339939[chr17:62406066]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 62406019 62406446 ZNF143 GTRD no Epithelial (MCF-7) 21778715
chr17 62406064 62406069 SP1 TRANSFAC yes 55298121
chr17 62406064 62406078 PLAG1 JASPAR yes 55298122
Genes associated with rs533339939[chr17:62406066], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More