EnhancerDB
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  3. rs533460035[chr12:96608225]
Enhancers that have rs533460035[chr12:96608225]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs533460035[chr12:96608225]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96608209 96608230 IRF1 JASPAR yes 123048345
chr12 96608211 96608231 RREB1 JASPAR yes 123048346
chr12 96608214 96608226 IRF1 JASPAR yes 123048347
chr12 96608214 96608229 FOXP1 JASPAR yes 123048348
chr12 96608216 96608236 RREB1 JASPAR yes 123048349
chr12 96608218 96608233 FOXP1 JASPAR yes 123048350
chr12 96608219 96608230 FOXA1 JASPAR yes 123048351
chr12 96608219 96608234 FOXA1 JASPAR yes 123048352
chr12 96608220 96608232 FOXC2 JASPAR yes 123048353
chr12 96608220 96608240 RREB1 JASPAR yes 123048354
chr12 96608221 96608233 FOXI1 JASPAR yes 123048355
chr12 96608221 96608241 RREB1 JASPAR yes 123048356
chr12 96608222 96608237 FOXP1 JASPAR yes 123048357
chr12 96608224 96608244 RREB1 JASPAR yes 123048358
chr12 96608225 96608237 FOXI1 JASPAR yes 123048359
chr12 96608225 96608245 RREB1 JASPAR yes 123048360
Genes associated with rs533460035[chr12:96608225], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More