EnhancerDB
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  3. rs533498009[chr1:118203482]
Enhancers that have rs533498009[chr1:118203482]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs533498009[chr1:118203482]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118203236 118203636 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334710
chr1 118203236 118203636 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107825408
chr1 118203280 118203556 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334711
chr1 118203480 118203495 SOX21 JASPAR yes 31890577
Genes associated with rs533498009[chr1:118203482], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More