EnhancerDB
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  3. rs533521554[chr1:202060581]
Enhancers that have rs533521554[chr1:202060581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs533521554[chr1:202060581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202060316 202061099 ZNF143 GTRD no Epithelial (MCF-7) 21367010
chr1 202060493 202060862 TCF7L2 GTRD no Colon (HCT116) 21367012
chr1 202060574 202060587 NR2F1 JASPAR yes 34552450
chr1 202060578 202060592 RXRB JASPAR yes 34552451
chr1 202060578 202060592 RXRG JASPAR yes 34552452
chr1 202060578 202060593 NR2C2 JASPAR yes 34552453
Genes associated with rs533521554[chr1:202060581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More