EnhancerDB
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  3. rs533755490[chr1:10962994]
Enhancers that have rs533755490[chr1:10962994]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10948885 10972333 enh11498
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Blood (T-cell) Stomach Muscle (A673) Placenta Thyroid Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs533755490[chr1:10962994]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10962980 10963000 ESR1 JASPAR yes 26759096
chr1 10962984 10963002 ESR2 JASPAR yes 26759097
chr1 10962989 10962994 MYC TRANSFAC yes 26759098
chr1 10962990 10963000 SP1 JASPAR yes 26759099
chr1 10962994 10963008 RXRB JASPAR yes 26759100
chr1 10962994 10963008 RXRG JASPAR yes 26759101
chr1 10962994 10963009 NR2C2 JASPAR yes 26759102
Genes associated with rs533755490[chr1:10962994], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More