EnhancerDB
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  3. rs533939048[chr19:3399275]
Enhancers that have rs533939048[chr19:3399275]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3395005 3410358 enh17863
Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Stomach
Transcript factors that have rs533939048[chr19:3399275]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3396636 3399586 ZNF274 GTRD no Liver (HepG2) 21839259
chr19 3396636 3399586 ZNF274 GTRD no Liver (HepG2) 108366555
chr19 3396636 3399586 ZNF274 GTRD no Liver (HepG2) 108366556
chr19 3396815 3399352 TCF7L2 GTRD no Colon (HCT116) 21839262
chr19 3396815 3399352 TCF7L2 GTRD no Colon (HCT116) 108366561
chr19 3396815 3399352 TCF7L2 GTRD no Colon (HCT116) 108366562
chr19 3396899 3399356 ZNF274 GTRD no Liver (HepG2) 21839264
chr19 3396899 3399356 ZNF274 GTRD no Liver (HepG2) 108366568
chr19 3396899 3399356 ZNF274 GTRD no Liver (HepG2) 108366569
chr19 3397194 3399327 ZNF274 GTRD no Liver (HepG2) 21839274
chr19 3397194 3399327 ZNF274 GTRD no Liver (HepG2) 108366589
chr19 3397194 3399327 ZNF274 GTRD no Liver (HepG2) 108366590
chr19 3397215 3399378 TCF7L2 GTRD no Colon (HCT116) 21839278
chr19 3397215 3399378 TCF7L2 GTRD no Colon (HCT116) 108366601
chr19 3397215 3399378 TCF7L2 GTRD no Colon (HCT116) 108366602
chr19 3398729 3399314 ZBTB33 GTRD no Lung (A549) 108366696
Genes associated with rs533939048[chr19:3399275], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More