EnhancerDB
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  3. rs533999508[chr1:28479872]
Enhancers that have rs533999508[chr1:28479872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28477646 28492815 enh183
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Ovary Esophagus Astrocyte Blood (OCI-LY7) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs533999508[chr1:28479872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28479859 28479873 JUN JASPAR yes 27747019
chr1 28479861 28479872 BATF JASPAR yes 27747021
chr1 28479862 28479873 FOSL2 JASPAR yes 27747022
chr1 28479862 28479873 JUNB JASPAR yes 27747023
chr1 28479863 28479874 FOS JASPAR yes 27747024
chr1 28479863 28479874 FOSL1 JASPAR yes 27747025
chr1 28479863 28479874 JUND JASPAR yes 27747026
chr1 28479863 28479874 NFE2 JASPAR yes 27747027
chr1 28479864 28479873 JDP2 JASPAR yes 27747028
chr1 28479872 28479877 ETS2 TRANSFAC yes 27747029
Genes associated with rs533999508[chr1:28479872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More