EnhancerDB
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  3. rs534016559[chr17:70378983]
Enhancers that have rs534016559[chr17:70378983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs534016559[chr17:70378983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70378801 70379325 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21784404
chr17 70378978 70378988 SP1 JASPAR yes 55780811
Genes associated with rs534016559[chr17:70378983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More