EnhancerDB
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  3. rs534196705[chr19:4812292]
Enhancers that have rs534196705[chr19:4812292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4796225 4815632 enh17875
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs534196705[chr19:4812292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4810975 4813607 TCF7L2 GTRD no Colon (HCT116) 21842252
chr19 4810975 4813607 TCF7L2 GTRD no Colon (HCT116) 108373065
chr19 4811219 4812404 ZNF143 GTRD no Epithelial (MCF-7) 21842253
chr19 4811269 4812407 ZNF274 GTRD no Cervix (HeLa-S3) 21842254
chr19 4811308 4812419 TCF7L2 GTRD no Colon (HCT116) 21842255
chr19 4811348 4812361 ZNF143 GTRD no Epithelial (MCF-7) 21842256
chr19 4811367 4812333 ZNF274 GTRD no Cervix (HeLa-S3) 21842257
chr19 4811485 4812362 ZNF274 GTRD no Cervix (HeLa-S3) 21842260
chr19 4811500 4812342 ZNF143 GTRD no Epithelial (MCF-7) 21842261
chr19 4811511 4812392 ZNF274 GTRD no Cervix (HeLa-S3) 21842264
chr19 4811520 4812305 TCF7L2 GTRD no Colon (HCT116) 21842267
chr19 4811546 4812375 TCF7L2 GTRD no Colon (HCT116) 21842271
chr19 4811572 4812339 TCF7L2 GTRD no Colon (HCT116) 21842273
chr19 4811662 4812455 TCF7L2 GTRD no Colon (HCT116) 21842277
chr19 4811677 4812328 ZNF143 GTRD no Epithelial (MCF-7) 21842278
chr19 4811831 4812339 TCF7L2 GTRD no Colon (HCT116) 21842292
chr19 4811851 4812367 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21842293
chr19 4811866 4812396 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21842294
chr19 4812271 4812292 IRF1 JASPAR yes 112192554
chr19 4812274 4812295 IRF1 JASPAR yes 112192556
chr19 4812277 4812292 FOXP1 JASPAR yes 112192557
chr19 4812279 4812294 FOXP1 JASPAR yes 112192558
chr19 4812280 4812295 FOXP1 JASPAR yes 112192559
chr19 4812281 4812296 FOXP1 JASPAR yes 112192560
Genes associated with rs534196705[chr19:4812292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More