EnhancerDB
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  3. rs534235202[chr7:1559279]
Enhancers that have rs534235202[chr7:1559279]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 1546890 1565055 enh23920
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs534235202[chr7:1559279]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 1559259 1559280 IRF1 JASPAR yes 12471754
chr7 1559263 1559283 RREB1 JASPAR yes 12471755
chr7 1559265 1559280 FOXA1 JASPAR yes 12471756
chr7 1559266 1559281 FOXP1 JASPAR yes 12471759
chr7 1559267 1559279 FOXC2 JASPAR yes 12471760
chr7 1559269 1559280 FOXA1 JASPAR yes 12471761
chr7 1559269 1559290 IRF1 JASPAR yes 12471762
chr7 1559270 1559285 FOXP1 JASPAR yes 12471763
chr7 1559271 1559282 FOXP2 JASPAR yes 12471764
chr7 1559271 1559283 FOXC2 JASPAR yes 12471765
chr7 1559271 1559286 STAT2 JASPAR yes 12471766
chr7 1559272 1559287 FOXP1 JASPAR yes 12471767
chr7 1559274 1559289 FOXP1 JASPAR yes 12471768
chr7 1559275 1559290 FOXP1 JASPAR yes 12471769
chr7 1559276 1559291 FOXP1 JASPAR yes 12471770
Genes associated with rs534235202[chr7:1559279], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More