EnhancerDB
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  3. rs534273860[chr1:172789979]
Enhancers that have rs534273860[chr1:172789979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172784470 172799215 enh732
Bone Marrow (K562) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs534273860[chr1:172789979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172789825 172790102 ZNF274 GTRD no Bone Marrow (K562) 21350309
chr1 172789969 172789984 FOXA1 JASPAR yes 33154147
chr1 172789970 172789985 FOXP1 JASPAR yes 33154148
chr1 172789971 172789982 FOXP2 JASPAR yes 33154149
chr1 172789971 172789983 FOXC2 JASPAR yes 33154150
chr1 172789971 172789985 FOXF2 JASPAR yes 33154151
chr1 172789973 172789984 FOXA1 JASPAR yes 33154152
chr1 172789975 172789987 FOXC2 JASPAR yes 33154153
chr1 172789977 172789981 YY1 TRANSFAC yes 33154154
chr1 172789977 172789998 IRF1 JASPAR yes 33154155
chr1 172789979 172789994 FOXP1 JASPAR yes 33154156
Genes associated with rs534273860[chr1:172789979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More