EnhancerDB
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  3. rs534424527[chr19:8412636]
Enhancers that have rs534424527[chr19:8412636]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 8412505 8422968 enh32882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs534424527[chr19:8412636]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 8411304 8412954 TCF7L2 GTRD no Colon (HCT116) 21847601
chr19 8412336 8413861 TCF7L2 GTRD no Colon (HCT116) 21847604
chr19 8412452 8413813 TCF7L2 GTRD no Colon (HCT116) 21847605
chr19 8412506 8413726 TCF7L2 GTRD no Colon (HCT116) 21847606
chr19 8412506 8413778 TCF7L2 GTRD no Colon (HCT116) 21847607
chr19 8412540 8413738 ZNF143 GTRD no Epithelial (MCF-7) 21847608
chr19 8412593 8413033 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21847609
chr19 8412602 8412972 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21847610
chr19 8412614 8413704 ZNF143 GTRD no Epithelial (MCF-7) 21847611
chr19 8412614 8413742 TCF7L2 GTRD no Colon (HCT116) 21847612
chr19 8412616 8412636 RREB1 JASPAR yes 112361781
chr19 8412619 8412640 IRF1 JASPAR yes 112361785
chr19 8412621 8412641 RREB1 JASPAR yes 112361786
chr19 8412622 8412958 POL24H8 ENCODE Uniform TFBS no Brain (SK-N-MC) 21847613
chr19 8412622 8413523 ZNF274 GTRD no Bone Marrow (K562) 21847614
chr19 8412623 8412638 STAT2 JASPAR yes 112361787
chr19 8412624 8412636 IRF1 JASPAR yes 112361788
chr19 8412626 8412646 RREB1 JASPAR yes 112361789
chr19 8412626 8412956 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21847615
chr19 8412626 8414250 ZNF274 GTRD no Bone Marrow (K562) 21847616
chr19 8412627 8412647 RREB1 JASPAR yes 112361790
chr19 8412630 8412650 RREB1 JASPAR yes 112361791
chr19 8412631 8412651 RREB1 JASPAR yes 112361792
chr19 8412631 8413007 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21847617
chr19 8412633 8412653 RREB1 JASPAR yes 112361793
chr19 8412636 8412656 RREB1 JASPAR yes 112361794
Genes associated with rs534424527[chr19:8412636], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More