EnhancerDB
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  3. rs534479229[chr12:117048843]
Enhancers that have rs534479229[chr12:117048843]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 117016285 117050187 enh15030
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs534479229[chr12:117048843]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 117047684 117049219 ZNF274 GTRD no Liver (HepG2) 108061873
chr12 117047730 117049541 ZNF143 GTRD no Epithelial (MCF-7) 21577822
chr12 117047730 117049541 ZNF143 GTRD no Epithelial (MCF-7) 108061874
chr12 117047801 117048869 ZNF143 GTRD no Epithelial (MCF-7) 21577824
chr12 117047836 117048857 ZNF143 GTRD no Epithelial (MCF-7) 21577825
chr12 117047848 117048867 ZNF143 GTRD no Epithelial (MCF-7) 21577826
chr12 117047865 117049098 ZNF274 GTRD no Liver (HepG2) 108061875
chr12 117047883 117049045 ZNF274 GTRD no Cervix (HeLa-S3) 21577828
chr12 117047883 117049045 ZNF274 GTRD no Cervix (HeLa-S3) 108061876
chr12 117047916 117049493 TCF7L2 GTRD no Colon (HCT116) 21577829
chr12 117047916 117049493 TCF7L2 GTRD no Colon (HCT116) 108061877
chr12 117047951 117048942 ZNF143 GTRD no Epithelial (MCF-7) 21577832
chr12 117047955 117049571 ZNF143 GTRD no Epithelial (MCF-7) 21577833
chr12 117047955 117049571 ZNF143 GTRD no Epithelial (MCF-7) 108061878
chr12 117047962 117049168 ZNF274 GTRD no Liver (HepG2) 108061879
chr12 117048224 117049293 ZNF274 GTRD no Blood (GM12878) 108061880
chr12 117048290 117049579 ZNF274 GTRD no Bone Marrow (K562) 21577852
chr12 117048290 117049579 ZNF274 GTRD no Bone Marrow (K562) 108061881
chr12 117048371 117049187 ZNF143 GTRD no Epithelial (MCF-7) 21577853
chr12 117048371 117049187 ZNF143 GTRD no Epithelial (MCF-7) 108061882
Genes associated with rs534479229[chr12:117048843], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More