EnhancerDB
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  3. rs534491194[chr12:53368435]
Enhancers that have rs534491194[chr12:53368435]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 53368339 53368600 vista13508
VISTA
Transcript factors that have rs534491194[chr12:53368435]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53368289 53368793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21548538
chr12 53368289 53368793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108035366
chr12 53368324 53368900 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548539
chr12 53368324 53368900 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035367
chr12 53368386 53368926 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548540
chr12 53368386 53368926 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035368
chr12 53368419 53368995 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21548541
chr12 53368419 53368995 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035369
chr12 53368419 53368995 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108035370
chr12 53368421 53368438 RARA JASPAR yes 82408790
chr12 53368421 53368438 RXRA JASPAR yes 82408791
chr12 53368421 53368438 RARA JASPAR yes 120968854
chr12 53368421 53368438 RXRA JASPAR yes 120968855
chr12 53368422 53368443 ZNF263 JASPAR yes 82408792
chr12 53368422 53368443 ZNF263 JASPAR yes 120968856
chr12 53368425 53368440 NR2C2 JASPAR yes 82408793
chr12 53368425 53368440 NR2C2 JASPAR yes 120968857
Genes associated with rs534491194[chr12:53368435], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More