EnhancerDB
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  3. rs534506489[chr13:111829111]
Enhancers that have rs534506489[chr13:111829111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111812424 111849400 enh3020
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Heart
Transcript factors that have rs534506489[chr13:111829111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111829097 111829112 FOXA1 JASPAR yes 60390656
chr13 111829098 111829112 POU4F1 JASPAR yes 60390658
chr13 111829098 111829113 HNF1A JASPAR yes 60390659
chr13 111829099 111829111 FOXC2 JASPAR yes 60390660
chr13 111829099 111829113 ONECUT3 JASPAR yes 60390661
chr13 111829100 111829111 FOXB1 JASPAR yes 60390662
chr13 111829100 111829111 FOXC1 JASPAR yes 60390663
chr13 111829100 111829111 PROP1 JASPAR yes 60390664
chr13 111829100 111829116 POU4F2 JASPAR yes 60390665
chr13 111829100 111829116 POU4F3 JASPAR yes 60390666
chr13 111829101 111829116 FOXA1 JASPAR yes 60390668
chr13 111829102 111829114 FOXI1 JASPAR yes 60390669
chr13 111829102 111829116 POU4F1 JASPAR yes 60390670
chr13 111829102 111829117 FOXP1 JASPAR yes 60390671
chr13 111829102 111829117 HNF1A JASPAR yes 60390672
chr13 111829103 111829115 FOXC2 JASPAR yes 60390673
chr13 111829103 111829117 ONECUT2 JASPAR yes 60390674
chr13 111829103 111829117 ONECUT3 JASPAR yes 60390675
chr13 111829104 111829115 FOXB1 JASPAR yes 60390676
chr13 111829104 111829115 FOXC1 JASPAR yes 60390677
chr13 111829104 111829115 PROP1 JASPAR yes 60390678
chr13 111829105 111829120 FOXA1 JASPAR yes 60390680
chr13 111829106 111829118 FOXI1 JASPAR yes 60390681
chr13 111829106 111829121 FOXP1 JASPAR yes 60390682
chr13 111829107 111829119 FOXC2 JASPAR yes 60390683
chr13 111829107 111829121 ONECUT2 JASPAR yes 60390684
chr13 111829107 111829121 ONECUT3 JASPAR yes 60390685
chr13 111829108 111829119 FOXB1 JASPAR yes 60390686
chr13 111829108 111829119 FOXC1 JASPAR yes 60390687
chr13 111829109 111829113 YY1 TRANSFAC yes 60390688
chr13 111829111 111829123 FOXC2 JASPAR yes 60390689
Genes associated with rs534506489[chr13:111829111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More