EnhancerDB
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  3. rs534507758[chr16:88989796]
Enhancers that have rs534507758[chr16:88989796]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88969235 88997095 enh16904
Bone Marrow (K562) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs534507758[chr16:88989796]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88988474 88991788 TCF7L2 GTRD no Colon (HCT116) 21737335
chr16 88988474 88991788 TCF7L2 GTRD no Colon (HCT116) 108224296
chr16 88988474 88991788 TCF7L2 GTRD no Colon (HCT116) 108224297
chr16 88988653 88991383 ZNF143 GTRD no Epithelial (MCF-7) 21737341
chr16 88988653 88991383 ZNF143 GTRD no Epithelial (MCF-7) 108224304
chr16 88988693 88991549 TCF7L2 GTRD no Colon (HCT116) 21737343
chr16 88988693 88991549 TCF7L2 GTRD no Colon (HCT116) 108224307
chr16 88988748 88991882 TCF7L2 GTRD no Colon (HCT116) 21737345
chr16 88988748 88991882 TCF7L2 GTRD no Colon (HCT116) 108224309
chr16 88988748 88991882 TCF7L2 GTRD no Colon (HCT116) 108224310
chr16 88988765 88990647 TCF7L2 GTRD no Colon (HCT116) 21737347
chr16 88988765 88990647 TCF7L2 GTRD no Colon (HCT116) 108224312
chr16 88988978 88990023 ZNF274 GTRD no Bone Marrow (K562) 21737351
chr16 88988978 88990023 ZNF274 GTRD no Bone Marrow (K562) 108224319
chr16 88989090 88989880 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108224322
chr16 88989784 88989796 TFAP2B JASPAR yes 12310071
chr16 88989784 88989796 TFAP2C JASPAR yes 12310072
Genes associated with rs534507758[chr16:88989796], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More