EnhancerDB
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  3. rs534539529[chr2:235206217]
Enhancers that have rs534539529[chr2:235206217]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235192981 235207115 enh6214
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs534539529[chr2:235206217]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235206196 235206217 ZNF263 JASPAR yes 81864009
chr2 235206197 235206218 IRF1 JASPAR yes 81864010
chr2 235206198 235206219 ZNF263 JASPAR yes 81864011
chr2 235206201 235206222 IRF1 JASPAR yes 81864012
chr2 235206202 235206223 ZNF263 JASPAR yes 81864013
chr2 235206203 235206218 PRDM1 JASPAR yes 81864014
chr2 235206205 235206226 IRF1 JASPAR yes 81864015
chr2 235206205 235206226 ZNF263 JASPAR yes 81864016
chr2 235206206 235206227 ZNF263 JASPAR yes 81864017
chr2 235206207 235206228 IRF1 JASPAR yes 81864018
chr2 235206209 235206224 PRDM1 JASPAR yes 81864019
chr2 235206209 235206230 ZNF263 JASPAR yes 81864020
chr2 235206210 235206231 ZNF263 JASPAR yes 81864021
chr2 235206211 235206232 IRF1 JASPAR yes 81864022
chr2 235206213 235206234 IRF1 JASPAR yes 81864023
chr2 235206213 235206234 ZNF263 JASPAR yes 81864024
chr2 235206215 235206236 IRF1 JASPAR yes 81864025
chr2 235206216 235206237 ZNF263 JASPAR yes 81864026
chr2 235206217 235206238 IRF1 JASPAR yes 81864027
Genes associated with rs534539529[chr2:235206217], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More