EnhancerDB
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  3. rs534563058[chr12:69403199]
Enhancers that have rs534563058[chr12:69403199]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 69398794 69405361 enh14817
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
chr12 69403025 69403359 vista13943
VISTA
Transcript factors that have rs534563058[chr12:69403199]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 69403056 69403383 SOX2 GTRD no Neural Stem Cells (H9) 108043782
chr12 69403123 69403480 SOX2 GTRD no Neural Stem Cells (H9) 108043783
chr12 69403187 69403199 MEF2A JASPAR yes 82429990
chr12 69403187 69403199 MEF2A JASPAR yes 121696672
chr12 69403192 69403205 POU3F3 JASPAR yes 82429994
chr12 69403192 69403205 POU3F3 JASPAR yes 121696676
chr12 69403196 69403199 MYB TRANSFAC yes 82429995
chr12 69403196 69403199 MYB TRANSFAC yes 121696677
chr12 69403196 69403207 PHOX2A JASPAR yes 82429996
chr12 69403196 69403207 PHOX2A JASPAR yes 121696678
Genes associated with rs534563058[chr12:69403199], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More